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installation
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Welcome to the documentation wiki for orchestra-sst code repository.
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conda config --add channels conda-forge
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> **Note** this documentation does not intent to fully explain every function but to provide an overview of what the code does and what we intended to do (put did not finish)
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Resources
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---------
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conda install -c conda-forge numpy pyreadr pandas xarray scipy
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- [Introduction](introduction)
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- [Installation](how-to-install)
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- [How to run in JASMIN](how-to-run-in-jasmin)
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- [Preliminary results](preliminary results)
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conda install -c conda-forge cartopy
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Repository structure
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---
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conda install -c conda-forge pyproj
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```mermaid
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graph LR;
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Repository --> src;
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Repository --> sst_tools;
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Repository --> scripts;
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Repository --> notebooks;
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Repository --> config.ini;
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scr --> id1["SLURM bash scripts to run the code in JASMIN"];
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rscripts --> id2["Python scripts to run each data processing stage"];
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docs --> id4["Jupyter notebooks explaining the workflow of the data"];
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config.yml --> id5["Configuration file"];
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```
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pip install git+https://github.com/fmaussion/salem.git
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conda install -c conda-forge configobj
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conda install -c conda-forge seaborn
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pip install shapely rasterio Pillow geopandas netcdf4 scikit-image joblib motionless dask Descartes
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conda install -c conda-forge netCDF4 joblib
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pip install git+https://github.com/fmaussion/salem.git
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conda install -c conda-forge ipykernel
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python -m ipykernel install --user --name ENVNAME --display-name "Python (whatever you want to call it)"
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