Skip to content

GitLab

  • Projects
  • Groups
  • Snippets
  • Help
    • Loading...
  • Help
    • Help
    • Support
    • Community forum
    • Submit feedback
    • Contribute to GitLab
  • Sign in
O ORCHESTRA-SST
  • Project overview
    • Project overview
    • Details
    • Activity
    • Releases
  • Repository
    • Repository
    • Files
    • Commits
    • Branches
    • Tags
    • Contributors
    • Graph
    • Compare
  • Issues 4
    • Issues 4
    • List
    • Boards
    • Labels
    • Service Desk
    • Milestones
  • Merge requests 0
    • Merge requests 0
  • CI/CD
    • CI/CD
    • Pipelines
    • Jobs
    • Schedules
  • Operations
    • Operations
    • Incidents
    • Environments
  • Analytics
    • Analytics
    • CI/CD
    • Repository
    • Value Stream
  • Wiki
    • Wiki
  • Snippets
    • Snippets
  • Members
    • Members
  • Activity
  • Graph
  • Create a new issue
  • Jobs
  • Commits
  • Issue Boards
Collapse sidebar
  • brivas
  • ORCHESTRA-SST
  • Wiki
  • How to run in jasmin

Last edited by Beartriz Recinos Rivas Aug 18, 2021
Page history
This is an old version of this page. You can view the most recent version or browse the history.

How to run in jasmin

Configuration file

After installing the environment in JASMIN you need to make sure you specify the corrects paths to the code repository, input and output data at the configuration file.

Note Check with Liz where the lastest version of SST data and drifters is located in JASMIN just to make sure if the paths above are correct.

Gridding process

The re-gridding of SST data and the interpolation of buoy coordinates to the satellite data is done by a single script under: ~/scripts/coarse_cci_sst.py

The corresponding SLURM script to submit this job in JASMIN can be found under ~/src/run_gridding.slurm.

Computing time series

Saving output as netcdf

Clone repository

Wiki pages

Home

Introduction
Installation