#!/bin/csh -f
#
# bak in Amsterdam before start of jc184 uhdas trial
# 3 July 2019
#
# prepare for reprocessing of single-ping data (i.e. running 
# quick_adcp.py)
# make links to contents of atsea and copy over config files
# as a starting point
#
# run after uhdas_01!  
#
# List of cruise segments to be processed is found in
# ~/cruise/data/vmadcp/cruise_segments

cd /local/users/pstar/cruise/data/vmadcp/spprocessing

foreach i (`cat /local/users/pstar/cruise/data/vmadcp/cruise_segments`)
echo linking ${i} to $1
link_uhdaslegs.py ../atsea/${i} $1
end

if (! -e config) then
mkdir config
cp ../atsea/${i}/raw/config/*_proc.py config/$1_proc.py
echo 'edit config/*proc.py cruiseid, uhdas_dir'
endif