diff --git a/inputs/namelist.bdy b/inputs/namelist.bdy
index 9c9803c558397e44c9594415fa83db8e44c5da4c..515e1c0dd78dd7950a7256d1de28d2a6b0f72a37 100644
--- a/inputs/namelist.bdy
+++ b/inputs/namelist.bdy
@@ -1,4 +1,4 @@
-!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
+!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
!! NEMO/OPA : namelist for BDY generation tool
!!
!! User inputs for generating open boundary conditions
@@ -7,29 +7,29 @@
!!
!! More info here.....
!!
-!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
+!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
-!-----------------------------------------------------------------------
+!------------------------------------------------------------------------------
! vertical coordinate
-!-----------------------------------------------------------------------
+!------------------------------------------------------------------------------
ln_zco = .false. ! z-coordinate - full steps (T/F)
ln_zps = .true. ! z-coordinate - partial steps (T/F)
ln_sco = .false. ! s- or hybrid z-s-coordinate (T/F)
rn_hmin = -10 ! min depth of the ocean (>0) or
! min number of ocean level (<0)
-!-----------------------------------------------------------------------
+!------------------------------------------------------------------------------
! s-coordinate or hybrid z-s-coordinate
-!-----------------------------------------------------------------------
+!------------------------------------------------------------------------------
rn_sbot_min = 10. ! minimum depth of s-bottom surface (>0) (m)
rn_sbot_max = 7000. ! maximum depth of s-bottom surface
! (= ocean depth) (>0) (m)
ln_s_sigma = .false. ! hybrid s-sigma coordinates
rn_hc = 150.0 ! critical depth with s-sigma
-!-----------------------------------------------------------------------
+!------------------------------------------------------------------------------
! grid information
-!-----------------------------------------------------------------------
+!------------------------------------------------------------------------------
sn_src_hgr = './benchmark/grid_low_res_C/mesh_hgr.nc'
sn_src_zgr = './benchmark/grid_low_res_C/mesh_zgr.nc'
sn_dst_hgr = './benchmark/grid_C/mesh_hgr_zps.nc'
@@ -37,63 +37,67 @@
sn_src_msk = './benchmark/grid_low_res_C/mask.nc'
sn_bathy = './benchmark/grid_C/NNA_R12_bathy_meter_bench.nc'
-!-----------------------------------------------------------------------
+!------------------------------------------------------------------------------
! I/O
-!-----------------------------------------------------------------------
- sn_src_dir = 'src_data.ncml' ! src_files/'
+!------------------------------------------------------------------------------
+ sn_src_dir = 'src_data.ncml' ! src_files/'
sn_dst_dir = './outputs'
- sn_fn = 'NNA_R12' ! prefix for output files
- nn_fv = -1e20 ! set fill value for output files
- nn_src_time_adj = 0 ! src time adjustment
+ sn_fn = 'NNA_R12' ! prefix for output files
+ nn_fv = -1e20 ! set fill value for output files
+ nn_src_time_adj = 0 ! src time adjustment
sn_dst_metainfo = 'Benchmarking Data'
-!-----------------------------------------------------------------------
+!------------------------------------------------------------------------------
! unstructured open boundaries
-!-----------------------------------------------------------------------
+!------------------------------------------------------------------------------
ln_coords_file = .true. ! =T : produce bdy coordinates files
- cn_coords_file = 'coordinates.bdy.nc' ! name of bdy coordinates files (if ln_coords_file=.TRUE.)
+ cn_coords_file = 'coordinates.bdy.nc' ! name of bdy coordinates files
+ ! (if ln_coords_file=.TRUE.)
ln_mask_file = .false. ! =T : read mask from file
- cn_mask_file = 'mask.nc' ! name of mask file (if ln_mask_file=.TRUE.)
- ln_dyn2d = .false. ! boundary conditions for barotropic fields
- ln_dyn3d = .false. ! boundary conditions for baroclinic velocities
+ cn_mask_file = 'mask.nc' ! name of mask file
+ ! (if ln_mask_file=.TRUE.)
+ ln_dyn2d = .false. ! boundary conditions for
+ ! barotropic fields
+ ln_dyn3d = .false. ! boundary conditions for
+ ! baroclinic velocities
ln_tra = .true. ! boundary conditions for T and S
ln_ice = .false. ! ice boundary condition
nn_rimwidth = 9 ! width of the relaxation zone
-!-----------------------------------------------------------------------
+!------------------------------------------------------------------------------
! unstructured open boundaries tidal parameters
-!-----------------------------------------------------------------------
+!------------------------------------------------------------------------------
ln_tide = .false. ! =T : produce bdy tidal conditions
- clname(1) = 'M2' ! constituent name
+ clname(1) = 'M2' ! constituent name
clname(2) = 'S2'
clname(3) = 'K2'
- ln_trans = .true.
-
-!-----------------------------------------------------------------------
+ ln_trans = .true. ! interpolate transport rather than
+ ! velocities
+!------------------------------------------------------------------------------
! Time information
-!-----------------------------------------------------------------------
+!------------------------------------------------------------------------------
nn_year_000 = 1979 ! year start
nn_year_end = 1979 ! year end
nn_month_000 = 11 ! month start (default = 1 is years>1)
nn_month_end = 11 ! month end (default = 12 is years>1)
sn_dst_calendar = 'gregorian' ! output calendar format
nn_base_year = 1960 ! base year for time counter
- sn_tide_grid = './inputs/tide/grid_tpxo7.2.nc'
- sn_tide_h = './inputs/tide/h_tpxo7.2.nc'
- sn_tide_u = './inputs/tide/u_tpxo7.2.nc'
+ sn_tide_grid = './src_data/tide/grid_tpxo7.2.nc'
+ sn_tide_h = './src_data/tide/h_tpxo7.2.nc'
+ sn_tide_u = './src_data/tide/u_tpxo7.2.nc'
-!-----------------------------------------------------------------------
+!------------------------------------------------------------------------------
! Additional parameters
-!-----------------------------------------------------------------------
+!------------------------------------------------------------------------------
nn_wei = 1 ! smoothing filter weights
rn_r0 = 0.041666666 ! decorrelation distance use in gauss
! smoothing onto dst points. Need to
! make this a funct. of dlon
- sn_history = 'EB bdy files produced by jofa from ORCA0083-N001 for testing'
+ sn_history = 'Benchmarking test case'
! history for netcdf file
ln_nemo3p4 = .true. ! else presume v3.2 or v3.3
nn_alpha = 0 ! Euler rotation angle
nn_beta = 0 ! Euler rotation angle
nn_gamma = 0 ! Euler rotation angle
- rn_mask_max_depth = 100.0 ! Maximum depth to be ignored for the mask
+ rn_mask_max_depth = 100.0 ! Maximum depth to be ignored for the mask
rn_mask_shelfbreak_dist = 20000.0 ! Distance from the shelf break