From 657dae3ea0361df471e14af8712513fa6630874f Mon Sep 17 00:00:00 2001 From: James Harle <jdha@noc.ac.uk> Date: Wed, 11 Sep 2019 09:10:07 +0100 Subject: [PATCH] Adding a local and remote version of the namelist to help with benchmarking --- inputs/namelist_local.bdy | 103 +++++++++++++++++++++++++++++++++++++ inputs/namelist_remote.bdy | 103 +++++++++++++++++++++++++++++++++++++ 2 files changed, 206 insertions(+) create mode 100644 inputs/namelist_local.bdy create mode 100644 inputs/namelist_remote.bdy diff --git a/inputs/namelist_local.bdy b/inputs/namelist_local.bdy new file mode 100644 index 0000000..41510a5 --- /dev/null +++ b/inputs/namelist_local.bdy @@ -0,0 +1,103 @@ +!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> +!! NEMO/OPA : namelist for BDY generation tool +!! +!! User inputs for generating open boundary conditions +!! employed by the BDY module in NEMO. Boundary data +!! can be set up for v3.2 NEMO and above. +!! +!! More info here..... +!! +!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> + +!------------------------------------------------------------------------------ +! vertical coordinate +!------------------------------------------------------------------------------ + ln_zco = .false. ! z-coordinate - full steps (T/F) + ln_zps = .true. ! z-coordinate - partial steps (T/F) + ln_sco = .false. ! s- or hybrid z-s-coordinate (T/F) + rn_hmin = -10 ! min depth of the ocean (>0) or + ! min number of ocean level (<0) + +!------------------------------------------------------------------------------ +! s-coordinate or hybrid z-s-coordinate +!------------------------------------------------------------------------------ + rn_sbot_min = 10. ! minimum depth of s-bottom surface (>0) (m) + rn_sbot_max = 7000. ! maximum depth of s-bottom surface + ! (= ocean depth) (>0) (m) + ln_s_sigma = .false. ! hybrid s-sigma coordinates + rn_hc = 150.0 ! critical depth with s-sigma + +!------------------------------------------------------------------------------ +! grid information +!------------------------------------------------------------------------------ + sn_src_hgr = './benchmark/grid_low_res_C/mesh_hgr.nc' + sn_src_zgr = './benchmark/grid_low_res_C/mesh_zgr.nc' + sn_dst_hgr = './benchmark/grid_C/mesh_hgr_zps.nc' + sn_dst_zgr = './benchmark/grid_C/mesh_zgr_zps.nc' + sn_src_msk = './benchmark/grid_low_res_C/mask.nc' + sn_bathy = './benchmark/grid_C/NNA_R12_bathy_meter_bench.nc' + +!------------------------------------------------------------------------------ +! I/O +!------------------------------------------------------------------------------ + sn_src_dir = '/Users/jdha/Projects/GitHub/PyNEMO/inputs/src_data.ncml' ! src_files/' + sn_dst_dir = './outputs' + sn_fn = 'NNA_R12' ! prefix for output files + nn_fv = -1e20 ! set fill value for output files + nn_src_time_adj = 0 ! src time adjustment + sn_dst_metainfo = 'Benchmarking Data' + +!------------------------------------------------------------------------------ +! unstructured open boundaries +!------------------------------------------------------------------------------ + ln_coords_file = .true. ! =T : produce bdy coordinates files + cn_coords_file = 'coordinates.bdy.nc' ! name of bdy coordinates files + ! (if ln_coords_file=.TRUE.) + ln_mask_file = .false. ! =T : read mask from file + cn_mask_file = 'mask.nc' ! name of mask file + ! (if ln_mask_file=.TRUE.) + ln_dyn2d = .false. ! boundary conditions for + ! barotropic fields + ln_dyn3d = .false. ! boundary conditions for + ! baroclinic velocities + ln_tra = .true. ! boundary conditions for T and S + ln_ice = .false. ! ice boundary condition + nn_rimwidth = 9 ! width of the relaxation zone + +!------------------------------------------------------------------------------ +! unstructured open boundaries tidal parameters +!------------------------------------------------------------------------------ + ln_tide = .false. ! =T : produce bdy tidal conditions + clname(1) = 'M2' ! constituent name + clname(2) = 'S2' + clname(3) = 'K2' + ln_trans = .true. ! interpolate transport rather than + ! velocities +!------------------------------------------------------------------------------ +! Time information +!------------------------------------------------------------------------------ + nn_year_000 = 1979 ! year start + nn_year_end = 1979 ! year end + nn_month_000 = 11 ! month start (default = 1 is years>1) + nn_month_end = 11 ! month end (default = 12 is years>1) + sn_dst_calendar = 'gregorian' ! output calendar format + nn_base_year = 1960 ! base year for time counter + sn_tide_grid = './src_data/tide/grid_tpxo7.2.nc' + sn_tide_h = './src_data/tide/h_tpxo7.2.nc' + sn_tide_u = './src_data/tide/u_tpxo7.2.nc' + +!------------------------------------------------------------------------------ +! Additional parameters +!------------------------------------------------------------------------------ + nn_wei = 1 ! smoothing filter weights + rn_r0 = 0.041666666 ! decorrelation distance use in gauss + ! smoothing onto dst points. Need to + ! make this a funct. of dlon + sn_history = 'Benchmarking test case' + ! history for netcdf file + ln_nemo3p4 = .true. ! else presume v3.2 or v3.3 + nn_alpha = 0 ! Euler rotation angle + nn_beta = 0 ! Euler rotation angle + nn_gamma = 0 ! Euler rotation angle + rn_mask_max_depth = 100.0 ! Maximum depth to be ignored for the mask + rn_mask_shelfbreak_dist = 20000.0 ! Distance from the shelf break diff --git a/inputs/namelist_remote.bdy b/inputs/namelist_remote.bdy new file mode 100644 index 0000000..41510a5 --- /dev/null +++ b/inputs/namelist_remote.bdy @@ -0,0 +1,103 @@ +!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> +!! NEMO/OPA : namelist for BDY generation tool +!! +!! User inputs for generating open boundary conditions +!! employed by the BDY module in NEMO. Boundary data +!! can be set up for v3.2 NEMO and above. +!! +!! More info here..... +!! +!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> + +!------------------------------------------------------------------------------ +! vertical coordinate +!------------------------------------------------------------------------------ + ln_zco = .false. ! z-coordinate - full steps (T/F) + ln_zps = .true. ! z-coordinate - partial steps (T/F) + ln_sco = .false. ! s- or hybrid z-s-coordinate (T/F) + rn_hmin = -10 ! min depth of the ocean (>0) or + ! min number of ocean level (<0) + +!------------------------------------------------------------------------------ +! s-coordinate or hybrid z-s-coordinate +!------------------------------------------------------------------------------ + rn_sbot_min = 10. ! minimum depth of s-bottom surface (>0) (m) + rn_sbot_max = 7000. ! maximum depth of s-bottom surface + ! (= ocean depth) (>0) (m) + ln_s_sigma = .false. ! hybrid s-sigma coordinates + rn_hc = 150.0 ! critical depth with s-sigma + +!------------------------------------------------------------------------------ +! grid information +!------------------------------------------------------------------------------ + sn_src_hgr = './benchmark/grid_low_res_C/mesh_hgr.nc' + sn_src_zgr = './benchmark/grid_low_res_C/mesh_zgr.nc' + sn_dst_hgr = './benchmark/grid_C/mesh_hgr_zps.nc' + sn_dst_zgr = './benchmark/grid_C/mesh_zgr_zps.nc' + sn_src_msk = './benchmark/grid_low_res_C/mask.nc' + sn_bathy = './benchmark/grid_C/NNA_R12_bathy_meter_bench.nc' + +!------------------------------------------------------------------------------ +! I/O +!------------------------------------------------------------------------------ + sn_src_dir = '/Users/jdha/Projects/GitHub/PyNEMO/inputs/src_data.ncml' ! src_files/' + sn_dst_dir = './outputs' + sn_fn = 'NNA_R12' ! prefix for output files + nn_fv = -1e20 ! set fill value for output files + nn_src_time_adj = 0 ! src time adjustment + sn_dst_metainfo = 'Benchmarking Data' + +!------------------------------------------------------------------------------ +! unstructured open boundaries +!------------------------------------------------------------------------------ + ln_coords_file = .true. ! =T : produce bdy coordinates files + cn_coords_file = 'coordinates.bdy.nc' ! name of bdy coordinates files + ! (if ln_coords_file=.TRUE.) + ln_mask_file = .false. ! =T : read mask from file + cn_mask_file = 'mask.nc' ! name of mask file + ! (if ln_mask_file=.TRUE.) + ln_dyn2d = .false. ! boundary conditions for + ! barotropic fields + ln_dyn3d = .false. ! boundary conditions for + ! baroclinic velocities + ln_tra = .true. ! boundary conditions for T and S + ln_ice = .false. ! ice boundary condition + nn_rimwidth = 9 ! width of the relaxation zone + +!------------------------------------------------------------------------------ +! unstructured open boundaries tidal parameters +!------------------------------------------------------------------------------ + ln_tide = .false. ! =T : produce bdy tidal conditions + clname(1) = 'M2' ! constituent name + clname(2) = 'S2' + clname(3) = 'K2' + ln_trans = .true. ! interpolate transport rather than + ! velocities +!------------------------------------------------------------------------------ +! Time information +!------------------------------------------------------------------------------ + nn_year_000 = 1979 ! year start + nn_year_end = 1979 ! year end + nn_month_000 = 11 ! month start (default = 1 is years>1) + nn_month_end = 11 ! month end (default = 12 is years>1) + sn_dst_calendar = 'gregorian' ! output calendar format + nn_base_year = 1960 ! base year for time counter + sn_tide_grid = './src_data/tide/grid_tpxo7.2.nc' + sn_tide_h = './src_data/tide/h_tpxo7.2.nc' + sn_tide_u = './src_data/tide/u_tpxo7.2.nc' + +!------------------------------------------------------------------------------ +! Additional parameters +!------------------------------------------------------------------------------ + nn_wei = 1 ! smoothing filter weights + rn_r0 = 0.041666666 ! decorrelation distance use in gauss + ! smoothing onto dst points. Need to + ! make this a funct. of dlon + sn_history = 'Benchmarking test case' + ! history for netcdf file + ln_nemo3p4 = .true. ! else presume v3.2 or v3.3 + nn_alpha = 0 ! Euler rotation angle + nn_beta = 0 ! Euler rotation angle + nn_gamma = 0 ! Euler rotation angle + rn_mask_max_depth = 100.0 ! Maximum depth to be ignored for the mask + rn_mask_shelfbreak_dist = 20000.0 ! Distance from the shelf break -- GitLab