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  • How to install

How to install · Changes

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Update How to install authored May 20, 2020 by Elizabeth Kent's avatar Elizabeth Kent
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How-to-install.md
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...@@ -26,6 +26,10 @@ with the most recent version of the following packages: ...@@ -26,6 +26,10 @@ with the most recent version of the following packages:
**External R software** **External R software**
- imma - imma
requires
- maptools
- reticulate
- chron
Install dependencies with conda (all platforms) Install dependencies with conda (all platforms)
---------------------------------- ----------------------------------
...@@ -71,25 +75,25 @@ will know is activated once you see the name of the environment (e.g r_env) ...@@ -71,25 +75,25 @@ will know is activated once you see the name of the environment (e.g r_env)
To install dependencies simply do: To install dependencies simply do:
~~~ ~~~
conda install -c conda-forge r-"package_name" conda install -c r r-"package_name"
~~~ ~~~
For example: For example:
~~~ ~~~
conda install -c conda-forge r-devtools conda install -c r r-devtools
~~~ ~~~
**IMMA toolbox** **IMMA toolbox**
The IMMA data format is used for the disemmination of the ICOADS marine data. The IMMA data format is used for the disemmination of the ICOADS marine data.
The package **imma** written also in R. The R-package **imma** provides function to apply quality control to the ICOADS data.
Provides function to read those files and to apply quality control to the data.
Must be installed manually by getting the .tar.gz file and running the following Must be installed manually by getting the .tar.gz file and running the following
script once your conda environment has been activated: script once your conda environment has been activated:
~~~ ~~~
conda install ./imma_0.0.1.tar.gz conda install ./imma_0.0.1.tar.gz
if the above doesn't work try R CMD INSTALL imma_0.0.1.tar.gz within the environment
~~~ ~~~
**Install the repository itself** **Install the repository itself**
......
Clone repository
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