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**Data input**
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**Data input**
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--------------
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--------------
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- ICOADS v3.0. [Freeman. *et al.,* (2017)](https://doi.org/10.1002/joc.4775).
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The following data is require by the scripts of this repository:
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- [ICOADS v3.0](https://icoads.noaa.gov/r3.html). [Freeman. *et al.,* (2017)](https://doi.org/10.1002/joc.4775).
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- Metadata from WMO Publication 47.
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- Metadata from WMO Publication 47.
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[Kent. *et al.,* (2007)](https://doi.org/10.1175/JTECH1949.1)
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[Kent. *et al.,* (2007)](https://doi.org/10.1175/JTECH1949.1)
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- CLIWOC logbook IDs. (couldn't find the link)
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- CLIWOC logbook IDs. (**needs a link**)
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- Inventory of ship names in the
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- Inventory of ship names in the
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[US Maury Collection](https://icoads.noaa.gov/software/transpec/maury/mauri_out)
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[US Maury Collection](https://icoads.noaa.gov/software/transpec/maury/mauri_out)
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- generate_id (by Dave... not so clear the source)
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- generate_id (**needs description**)
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- Precision criteria:
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- **Precision criteria file**. An estimate of the precision of each key variable (e.g. sst, lat, lon) per DCK,
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an estimate of the precision of each key variable (e.g. sst, lat, lon) per DCK,
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year and or SID. This precision criteria is require in order to set tolerances
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year and or SID. This precision criteria is require in order to set tolerances
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when comparing variables from ICOADS. Comparison of variables allows for
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when comparing variables from ICOADS. Comparison of variables allows for
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a match between reports in the duplicate identification procedure.
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a match between reports in the duplicate identification procedure.
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- Json files containing ITU callsign prefixes associated with a country.
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- **Json files** containing ITU callsign prefixes associated with a country.
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- seq IDS.
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- **seq IDS.** (**needs description**)
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**Processing stages**
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**Processing stages**
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--------------------
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--------------------
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| ... | @@ -22,7 +23,8 @@ when comparing variables from ICOADS. Comparison of variables allows for |
... | @@ -22,7 +23,8 @@ when comparing variables from ICOADS. Comparison of variables allows for |
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The following diagram is a summary of the data processing workflow follow by
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The following diagram is a summary of the data processing workflow follow by
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the shell scripts defined in ```scr```. Each block
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the shell scripts defined in ```scr```. Each block
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represents a main task done by one script in```rscripts```.
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represents a main task done by one script in```rscripts```.
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The corresponding `.R` file name is highlight in grey between each stage.
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The corresponding `.R` file name is highlight in grey between each stage
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(For more information on eah `.R` script, please see the [API-reference](api-reference))
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Orange blocks represent pre-processing tasks done to the ICOADS data base,
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Orange blocks represent pre-processing tasks done to the ICOADS data base,
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in order to:
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in order to:
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