GitLab

combined rapid and hydro versions of backup_sync scripts into cruise_backup; added backup of mount_commands

this script would generate its directories
(no ladcp or vmadcp at this stage)
-YLF
	new file:   cruisedir_setup_scripts/conf_script_dy000

updated ctd_linkscript for jc211
updated cruise backup script
added to documentation for uhdas_ mstar scripts

 Committer: PStar User Account <pstar@192.168.122.1>

moved some files to new subdirectory backups_syncs

	renamed:    backup_core_local -> backups_syncs/backup_core_local
	renamed:    keep_workstation2_in_sync -> backups_syncs/keep_workstation2_in_sync
	renamed:    mexec_cruise_backup -> backups_syncs/mexec_cruise_backup
	renamed:    mexec_cruise_backup_public -> backups_syncs/mexec_cruise_backup_public
	new file:   clean_oxygen_csv.csh
	modified:   commands/mstar_dotcshrc
	new file:   cruisedir_setup_scripts/conf_script_dy129
	deleted:    quick_run.log
	deleted:    rapid/rapid_get_weather

 Committer: PStar User Account <pstar@192.168.122.1>

 On branch jc211
 Changes to be committed:

	new file:   cruisedir_setup_scripts/conf_script_dy120
	new file:   uhdas_linkscript

uhdas_03_copy_asclog_for_editing now can specify and apply calibrations
uhdas_04_export_nc specifies cruise near top of script

 Committer: PStar User Account <pstar@192.168.122.1>

 On branch jc211
 Changes to be committed:
   (use "git reset HEAD <file>..." to unstage)

	modified:   uhdas_03_copy_asclog_for_editing
	modified:   uhdas_04_export_nc

set up jc211 configuration script
some organising, removed uhdas_?? links (use tab complete)
switched uhdas_00 and uhdas_01 so now order to run is uhdas_00, uhdas_01, uhdas_02 (optionally skipping uhdas_01)

 Committer: PStar User Account <pstar@192.168.122.1>

 On branch jc211
 Changes to be committed:
   (use "git reset HEAD <file>..." to unstage)

	new file:   cruisedir_setup_scripts/conf_script_dy112
	new file:   cruisedir_setup_scripts/conf_script_dy113
	new file:   cruisedir_setup_scripts/conf_script_jc211
	deleted:    ctd_linkscript_atstart_jc191
	deleted:    ctd_linkscript_from_jc159
	renamed:    keep_akeake_in_sync -> keep_workstation2_in_sync
	deleted:    lad_linkscript_ix_atstart_jc191
	deleted:    lad_linkscript_ix_from_jc159
	deleted:    lad_linkscript_uh_atstart_jc191
	deleted:    lad_linkscript_uhpy_atstart_jc191
	modified:   mexec_cruise_backup
	deleted:    mexec_cruise_backup_jc184
	deleted:    mexec_cruise_backup_jc191
	renamed:    rapid_backup -> rapid/rapid_backup
	renamed:    rapid_get_weather -> rapid/rapid_get_weather
	deleted:    uhdas_00
	renamed:    uhdas_01_syncraw -> uhdas_00_syncraw
	deleted:    uhdas_01
	renamed:    uhdas_00_linkmerge -> uhdas_01_linkmerge
	deleted:    uhdas_02
	modified:   uhdas_02_sync_postprocessing_from_raw
	deleted:    uhdas_03
	deleted:    uhdas_04
	deleted:    uhdas_05

 Committer: PStar User Account <pstar@192.168.122.1>

 On branch jc191
 Changes to be committed:
   (use "git reset HEAD <file>..." to unstage)

	modified:   README.md
	new file:   backup_core_local
	new file:   keep_akeake_in_sync
	new file:   rapid_backup

mexec_processing_scripts and exec to mexec-exec git (so nothing
should need to be copied from older cruises)