Update README contents

README.md

@@ -7,21 +7,79 @@ facilitate configuration archival and sharing:
 <pre>
 BoBEAS
 |____NAMELISTS_AND_FORTRAN_FILES
-| |----namelist_cfg
-| |----namelist_ref
+| |___INITIAL_CONDITION
+| | |____initcd_vosaline.namelist
+| | |____initcd_votemper.namelist
+| | |____namelist_reshape_bilin_initcd_vosaline
+| | |____namelist_reshape_bilin_initcd_votemper
+| | |____sosie.x
+| |
+| |___RUN_DIRECTORY
+| | |____namelist_cfg
+| | |____namelist_ref
+| |
+| |___TIDES
+| | |____inputs_dst.ncml
+| | |____inputs_src.ncml
+| | |____namelist.bdy
+| | |____run_script.pbs
+| |
+| |___f_files
+| | |____bdyini.F90
+| | |____diaharm.F90
+| | |____diaharm_fast.F90
+| | |____dommsk.F90
+| | |____dtatsd.F90
+| | |____par_oce.F90
+| | |____sbctide.F90
+| | |____step.F90
+| | |____step_oce.F90
+| | |____tide_FES14.h90
+| | |____tide_mod.F90
+| | |____tideini.F90
+| |
+| |___p_files
+| | |____scrip.patch
+| | |____scripgrid.patch
+| | |____scripinterp.patch
+| | |____scripinterp_mod.patch
+| | |____scripshape.patch
+
+
 |
 |____SCRIPTS
-| |----main1.sh
-| |----make_paths.sh
-| |----make_directories.sh
-| |----load_modules_1.sh
-| |----make_xios.sh
-| |----make_nemo.sh
-| |----make_tools.sh
-| |----create_coordinates.sh
-| |----load_modules_2.sh
-| |----fix_elevations.sh
+| |____load_modules_1.sh
+| |____make_tools.sh
+| |____create_coordinates.sh
+| |____load_modules_2.sh
+| |____main1.sh
+| |____fix_elevation.sh
+| |____make_directories.sh
+| |____python_script.sh
+| |____python_tide.sh
+| |____scri.sh
+| |____setup_python_obc.sh
+| |____setup_python_tide.sh~
+| |____setup_python_tide.sh
 | |____interpolate_gebco.sh
+| |____make_domain_cfg.sh
+| |____make_nemo.sh
+| |____make_paths.sh
+| |____make_tides.sh
+| |____make_xios.sh
+| |____bdy_obc.m
+| |____COPERNICUS_INTERP_SSH.m
+| |____nemo_IC_temperature.m
+| |____nemo_IC_salinity.m
+| |____COPERNICUS_INTERP.m
+| |____obc_Sal.m
+| |____obc_U.m
+| |____obc_V.m
+| |____obc_Temp.m
+| |____obc_SSH.m
+| |____river_maker.m
+| |____Coast_finder.m
+| |____smooth2.m
 |
 |____README.md
 </pre>