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+ 12126
- 97
AR‎CH‎
arch-XC_ARCH‎ER_INTEL.fcm‎ +61 -0
EXP_‎Apr19‎
context_‎nemo.xml‎ +120 -0
domain_de‎f_nemo.xml‎ +258 -0
field_def_n‎emo-lim.xml‎ +182 -0
field_def_n‎emo-opa.xml‎ +1107 -0
field_def_ne‎mo-pisces.xml‎ +298 -0
file_def_n‎emo-opa.xml‎ +55 -0
file_def‎_nemo.xml‎ +153 -0
iode‎f.xml‎ +27 -0
nameli‎st_cfg‎ +1251 -0
nameli‎st_ref‎ +1198 -0
run_scr‎ipt.pbs‎ +41 -0
MY_‎SRC‎
bdyin‎i.F90‎ +1743 -0
diaha‎rm.F90‎ +848 -0
diaharm_‎fast.F90‎ +857 -0
domms‎k.F90‎ +303 -0
dtats‎d.F90‎ +298 -0
dynnx‎t.F90‎ +428 -0
dynsp‎g.F90‎ +242 -0
par_o‎ce.F90‎ +90 -0
sbcti‎de.F90‎ +137 -0
step‎.F90‎ +364 -0
step_o‎ce.F90‎ +127 -0
stpct‎l.F90‎ +189 -0
tide_FE‎S14.h90‎ +114 -0
tide_m‎od.F90‎ +430 -0
tidei‎ni.F90‎ +125 -0
usrdef_i‎state.F90‎ +73 -0
usrdef_‎sbc.F90‎ +86 -0
NAMELISTS_AND‎_FORTRAN_FILES‎
INITIAL_‎CONDITION‎
initcd_vosal‎ine.namelist‎ +7 -7
initcd_votem‎per.namelist‎ +7 -7
namelist_reshape_bi‎lin_initcd_vosaline‎ +1 -1
namelist_reshape_bi‎lin_initcd_votemper‎ +1 -1
sosie_i‎nitcd_T‎ +26 -0
f_f‎iles‎
dynnx‎t.F90‎ +428 -0
dynsp‎g.F90‎ +242 -0
stpct‎l.F90‎ +189 -0
SCR‎IPTS‎
make_n‎emo.sh‎ +6 -6
make_p‎aths.sh‎ +1 -1
.giti‎gnore‎ +2 -0
READ‎ME.md‎ +5 -74
cpp_fi‎le.fcm‎ +6 -0
ARCH/arch-XC_ARCHER_INTEL.fcm
+ 61
- 0
# compiler options for Archer CRAY XC-30 (using intel compiler)
#
# NCDF_HOME root directory containing lib and include subdirectories for netcdf4
# HDF5_HOME root directory containing lib and include subdirectories for HDF5
# XIOS_HOME root directory containing lib for XIOS
# OASIS_HOME root directory containing lib for OASIS
#
# NCDF_INC netcdf4 include file
# NCDF_LIB netcdf4 library
# XIOS_INC xios include file (taken into accound only if key_iomput is activated)
# XIOS_LIB xios library (taken into accound only if key_iomput is activated)
# OASIS_INC oasis include file (taken into accound only if key_oasis3 is activated)
# OASIS_LIB oasis library (taken into accound only if key_oasis3 is activated)
#
# FC Fortran compiler command
# FCFLAGS Fortran compiler flags
# FFLAGS Fortran 77 compiler flags
# LD linker
# LDFLAGS linker flags, e.g. -L<lib dir> if you have libraries
# FPPFLAGS pre-processing flags
# AR assembler
# ARFLAGS assembler flags
# MK make
# USER_INC complete list of include files
# USER_LIB complete list of libraries to pass to the linker
# CC C compiler used to compile conv for AGRIF
# CFLAGS compiler flags used with CC
#
# Note that:
# - unix variables "$..." are accpeted and will be evaluated before calling fcm.
# - fcm variables are starting with a % (and not a $)
#
%NCDF_HOME $NETCDF_DIR
%HDF5_HOME $HDF5_DIR
%XIOS_HOME /work/n01/n01/$USER/XIOS
#OASIS_HOME
%NCDF_INC -I%NCDF_HOME/include -I%HDF5_HOME/include
%NCDF_LIB -L%HDF5_HOME/lib -L%NCDF_HOME/lib -lnetcdff -lnetcdf -lhdf5_hl -lhdf5 -lz
%XIOS_INC -I%XIOS_HOME/inc
%XIOS_LIB -L%XIOS_HOME/lib -lxios
#OASIS_INC -I%OASIS_HOME/build/lib/mct -I%OASIS_HOME/build/lib/psmile.MPI1
#OASIS_LIB -L%OASIS_HOME/lib -lpsmile.MPI1 -lmct -lmpeu -lscrip
%CPP cpp
%FC ftn
%FCFLAGS -integer-size 32 -real-size 64 -g -O3 -fp-model source -zero -fpp -warn all
%FFLAGS -integer-size 32 -real-size 64 -g -O3 -fp-model source -zero -fpp -warn all
%LD CC -Wl,"--allow-multiple-definition"
%FPPFLAGS -P -C -traditional
%LDFLAGS
%AR ar
%ARFLAGS -r
%MK gmake
%USER_INC %XIOS_INC %NCDF_INC
%USER_LIB %XIOS_LIB %NCDF_LIB
#USER_INC %XIOS_INC %OASIS_INC %NCDF_INC
#USER_LIB %XIOS_LIB %OASIS_LIB %NCDF_LIB
%CC cc
%CFLAGS -O0
EXP_Apr19/context_nemo.xml
+ 120
- 0
<!--
==============================================================================================
NEMO context
==============================================================================================
-->
<context id="nemo">
<!-- $id$ -->
<!-- Fields definition -->
<field_definition src="./field_def_nemo-opa.xml"/> <!-- NEMO ocean dynamics -->
<!-- Files definition -->
<file_definition src="./file_def_nemo.xml"/> <!-- NEMO ocean dynamics -->
<!--
============================================================================================================
= grid definition = = DO NOT CHANGE =
============================================================================================================
-->
<axis_definition>
<axis id="deptht" long_name="Vertical T levels" unit="m" positive="down" />
<axis id="depthu" long_name="Vertical U levels" unit="m" positive="down" />
<axis id="depthv" long_name="Vertical V levels" unit="m" positive="down" />
<axis id="depthw" long_name="Vertical W levels" unit="m" positive="down" />
<axis id="nfloat" long_name="Float number" unit="-" />
<axis id="icbcla" long_name="Iceberg class" unit="1" />
<axis id="ncatice" long_name="Ice category" unit="1" />
<axis id="iax_20C" long_name="20 degC isotherm" unit="degC" />
<axis id="iax_28C" long_name="28 degC isotherm" unit="degC" />
</axis_definition>
<domain_definition src="./domain_def_nemo.xml"/>
<grid_definition>
<!-- -->
<grid id="grid_T_2D" >
<domain id="grid_T" />
</grid>
<!-- -->
<grid id="grid_T_3D_ncatice" >
<domain id="grid_T" />
<axis id="ncatice" />
</grid>
<!-- -->
<grid id="grid_T_3D" >
<domain id="grid_T" />
<axis id="deptht" />
</grid>
<!-- -->
<grid id="grid_U_2D" >
<domain id="grid_U" />
</grid>
<!-- -->
<grid id="grid_U_3D" >
<domain id="grid_U" />
<axis id="depthu" />
</grid>
<!-- -->
<grid id="grid_V_2D" >
<domain id="grid_V" />
</grid>
<!-- -->
<grid id="grid_V_3D" >
<domain id="grid_V" />
<axis id="depthv" />
</grid>
<!-- -->
<grid id="grid_W_2D" >
<domain id="grid_W" />
</grid>
<!-- -->
<grid id="grid_W_3D" >
<domain id="grid_W" />
<axis id="depthw" />
</grid>
<!-- -->
<grid id="grid_1point" >
<domain domain_ref="1point"/>
</grid>
<!-- -->
<grid id="grid_T_nfloat" >
<domain id="grid_T" />
<axis id="nfloat" />
</grid>
<!-- -->
<grid id="grid_EqT" >
<domain domain_ref="EqT" />
</grid>
<!-- -->
<grid id="grid_znl_T_2D">
<domain id="gznl" />
</grid>
<!-- -->
<grid id="grid_znl_T_3D">
<domain id="gznl" />
<axis id="deptht" />
</grid>
<!-- -->
<grid id="grid_znl_W_3D">
<domain id="gznl" />
<axis id="depthw" />
</grid>
<grid id="grid_ptr_T_2D">
<domain id="ptr" />
</grid>
<grid id="grid_ptr_T_3D">
<domain id="ptr" />
<axis id="deptht" />
</grid>
<grid id="grid_ptr_W_3D">
<domain id="ptr" />
<axis id="depthw" />
</grid>
</grid_definition>
</context>
EXP_Apr19/domain_def_nemo.xml
+ 258
- 0
<domain_definition>
<domain_group id="grid_T">
<domain id="grid_T" long_name="grid T"/>
<!-- My zoom: example of hand defined zoom -->
<domain id="moorT" ibegin="39" jbegin="82" ni="1" nj="1" />
<domain id="sec01T" ibegin="33" jbegin="62" ni="28" nj="1" />
<domain id="sec02T" ibegin="34" jbegin="68" ni="27" nj="1" />
<domain id="sec03T" ibegin="29" jbegin="75" ni="18" nj="1" />
<domain id="sec04T" ibegin="29" jbegin="80" ni="16" nj="1" />
<domain id="sec05T" ibegin="25" jbegin="88" ni="12" nj="1" />
<domain id="sec06T" ibegin="25" jbegin="91" ni="7" nj="1" />
<domain id="sec07T" ibegin="25" jbegin="92" ni="3" nj="1" />
<domain id="sec08T" ibegin="57" jbegin="77" ni="4" nj="1" />
<domain id="sec09T" ibegin="61" jbegin="62" ni="1" nj="15" />
<domain id="sec00ST" ibegin="2" jbegin="2" ni="115" nj="1" />
<domain id="sec00NT" ibegin="2" jbegin="104" ni="115" nj="1" />
<domain id="sec00WT" ibegin="2" jbegin="2" ni="1" nj="103" />
<domain id="sec00ET" ibegin="116" jbegin="2" ni="1" nj="103" />
<domain id="1point" domain_ref="grid_T" >
<zoom_domain id="1point" ibegin="139" jbegin="119" ni="1" nj="1" />
</domain>
<!-- Eq section -->
<domain id="EqT" domain_ref="grid_T" >
<zoom_domain id="EqT" ibegin="0" jbegin="0000" ni="0000" nj="1" />
</domain>
<!-- TAO : see example above -->
<!-- 137e -->
<!-- <domain id="2n137eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="5n137eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="8n137eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <\!-- 147e -\-> -->
<!-- <domain id="0n147eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="2n147eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="5n147eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <\!-- 156e -\-> -->
<!-- <domain id="5s156eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="2s156eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="0n156eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="2n156eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="5n156eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="8n156eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <\!-- 165e -\-> -->
<!-- <domain id="8s165eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="5s165eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="2s165eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="0n165eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="2n165eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="5n165eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="8n165eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <\!-- 180w -\-> -->
<!-- <domain id="8s180wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="5s180wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="2s180wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="0n180wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="2n180wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="5n180wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="8n180wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <\!-- 170w -\-> -->
<!-- <domain id="8s170wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="5s170wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="2s170wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="0n170wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="2n170wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="5n170wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="8n170wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <\!-- 155w -\-> -->
<!-- <domain id="8s155wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="5s155wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="2s155wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="0n155wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="2n155wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="5n155wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="8n155wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <\!-- 140w -\-> -->
<!-- <domain id="8s140wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="5s140wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="2s140wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="0n140wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="2n140wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="5n140wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="8n140wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <\!-- 125w -\-> -->
<!-- <domain id="8s125wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="5s125wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="2s125wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="0n125wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="2n125wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="5n125wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="8n125wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <\!-- 110w -\-> -->
<!-- <domain id="8s110wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="5s110wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="2s110wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="0n110wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="2n110wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="5n110wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="8n110wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <\!-- 95w -\-> -->
<!-- <domain id="8s95wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="5s95wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="2s95wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="0n95wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="2n95wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="5n95wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="8n95wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <\!-- RAMA -\-> -->
<!-- <\!-- 55e -\-> -->
<!-- <domain id="16s55eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="12s55eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="8s55eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="4s55eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="1.5s55eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="0n55eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="1.5n55eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="4n55eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <\!-- 65e -\-> -->
<!-- <domain id="15n65eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <\!-- 67e -\-> -->
<!-- <domain id="16s67eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="12s67eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="8s67eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="4s67eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="1.5s67eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="0n67eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="1.5n67eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="4n67eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="8n67eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <\!-- 80.5e -\-> -->
<!-- <domain id="16s80.5eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="12s80.5eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="8s80.5eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="4s80.5eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="1.5s80.5eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="0n80.5eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="1.5n80.5eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="4n80.5eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <\!-- 90e -\-> -->
<!-- <domain id="1.5s90eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="0n90eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="1.5n90eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="4n90eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="8n90eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="12n90eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="15n90eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <\!-- 95e -\-> -->
<!-- <domain id="16s95eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="12s95eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="8s95eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="5s95eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <\!-- PIRATA -\-> -->
<!-- <\!-- 38w-30w -\-> -->
<!-- <domain id="19s34wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="14s32wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="8s30wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="0n35wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="4n38wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="8n38wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="12n38wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="15n38wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="20n38wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <\!-- 23w -\-> -->
<!-- <domain id="0n23wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="4n23wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="12n23wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="21n23wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <\!-- 10w -\-> -->
<!-- <domain id="10s10wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="6s10wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <domain id="0n10wT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
<!-- <\!-- 0e -\-> -->
<!-- <domain id="0n0eT" domain_ref="grid_T" ibegin="0000" jbegin="0000" ni="1" nj="1" /> -->
</domain_group>
<domain_group id="grid_U">
<domain id="grid_U" long_name="grid U"/>
<!-- My zoom: example of hand defined zoom -->
<domain id="moorU" ibegin="39" jbegin="82" ni="1" nj="1" />
<domain id="sec01U" ibegin="33" jbegin="62" ni="28" nj="1" />
<domain id="sec02U" ibegin="34" jbegin="68" ni="27" nj="1" />
<domain id="sec03U" ibegin="29" jbegin="75" ni="18" nj="1" />
<domain id="sec04U" ibegin="29" jbegin="80" ni="16" nj="1" />
<domain id="sec05U" ibegin="25" jbegin="88" ni="12" nj="1" />
<domain id="sec06U" ibegin="25" jbegin="91" ni="7" nj="1" />
<domain id="sec07U" ibegin="25" jbegin="92" ni="3" nj="1" />
<domain id="sec08U" ibegin="57" jbegin="77" ni="4" nj="1" />
<domain id="sec09U" ibegin="61" jbegin="62" ni="1" nj="15" />
<domain id="sec00SU" ibegin="2" jbegin="2" ni="115" nj="1" />
<domain id="sec00NU" ibegin="2" jbegin="104" ni="115" nj="1" />
<domain id="sec00WU" ibegin="2" jbegin="2" ni="1" nj="103" />
<domain id="sec00EU" ibegin="116" jbegin="2" ni="1" nj="103" />
<!-- Eq section -->
<domain id="EqU" ibegin="1" jbegin="0000" ni="0000" nj="1" />
</domain_group>
<domain_group id="grid_V">
<domain id="grid_V" long_name="grid V"/>
<!-- My zoom: example of hand defined zoom -->
<domain id="moorV" ibegin="39" jbegin="82" ni="1" nj="1" />
<domain id="sec01V" ibegin="33" jbegin="62" ni="28" nj="1" />
<domain id="sec02V" ibegin="34" jbegin="68" ni="27" nj="1" />
<domain id="sec03V" ibegin="29" jbegin="75" ni="18" nj="1" />
<domain id="sec04V" ibegin="29" jbegin="80" ni="16" nj="1" />
<domain id="sec05V" ibegin="25" jbegin="88" ni="12" nj="1" />
<domain id="sec06V" ibegin="25" jbegin="91" ni="7" nj="1" />
<domain id="sec07V" ibegin="25" jbegin="92" ni="3" nj="1" />
<domain id="sec08V" ibegin="57" jbegin="77" ni="4" nj="1" />
<domain id="sec09V" ibegin="61" jbegin="62" ni="1" nj="15" />
<domain id="sec00SV" ibegin="2" jbegin="2" ni="115" nj="1" />
<domain id="sec00NV" ibegin="2" jbegin="104" ni="115" nj="1" />
<domain id="sec00WV" ibegin="2" jbegin="2" ni="1" nj="103" />
<domain id="sec00EV" ibegin="116" jbegin="2" ni="1" nj="103" />
</domain_group>
<domain_group id="grid_W">
<domain id="grid_W" long_name="grid W"/>
<!-- My zoom: example of hand defined zoom -->
<domain id="moorW" ibegin="39" jbegin="82" ni="1" nj="1" />
<domain id="sec01W" ibegin="33" jbegin="62" ni="28" nj="1" />
<domain id="sec02W" ibegin="34" jbegin="68" ni="27" nj="1" />
<domain id="sec03W" ibegin="29" jbegin="75" ni="18" nj="1" />
<domain id="sec04W" ibegin="29" jbegin="80" ni="16" nj="1" />
<domain id="sec05W" ibegin="25" jbegin="88" ni="12" nj="1" />
<domain id="sec06W" ibegin="25" jbegin="91" ni="7" nj="1" />
<domain id="sec07W" ibegin="25" jbegin="92" ni="3" nj="1" />
<domain id="sec08W" ibegin="57" jbegin="77" ni="4" nj="1" />
<domain id="sec09W" ibegin="61" jbegin="62" ni="1" nj="15" />
<domain id="sec00SW" ibegin="2" jbegin="2" ni="115" nj="1" />
<domain id="sec00NW" ibegin="2" jbegin="104" ni="115" nj="1" />
<domain id="sec00WW" ibegin="2" jbegin="2" ni="1" nj="103" />
<domain id="sec00EW" ibegin="116" jbegin="2" ni="1" nj="103" />
<!-- Eq section -->
<domain id="EqW" ibegin="1" jbegin="0000" ni="0000" nj="1" />
</domain_group>
<domain_group id="scalarpoint">
<domain id="scalarpoint" long_name="scalar"/>
</domain_group>
<domain_group id="gznl">
<domain id="gznl" long_name="gznl"/>
<domain id="ptr" domain_ref="gznl" >
<zoom_domain id="ptr" ibegin="0000" jbegin="0" ni="1" nj="0000" />
</domain>
</domain_group>
</domain_definition>
EXP_Apr19/field_def_nemo-lim.xml
+ 182
- 0
<?xml version="1.0"?>
<!-- $id$ -->
<!--
============================================================================================================
= definition of all existing variables =
= DO NOT CHANGE =
============================================================================================================
-->
<field_definition level="1" prec="4" operation="average" enabled=".TRUE." default_value="1.e20" > <!-- time step automaticaly defined -->
<field_group id="SBC" grid_ref="grid_T_2D" > <!-- time step automaticaly defined based on nn_fsbc -->
<!-- LIM2(only) fields -->
<field id="qsr_ai_cea" long_name="Air-Ice downward solar heat flux (cell average)" standard_name="surface_downwelling_shortwave_flux_in_air" unit="W/m2" />
<field id="qns_ai_cea" long_name="Air-Ice downward non-solar heat flux (cell average)" unit="W/m2" />
<field id="qla_ai_cea" long_name="Air-Ice downward Latent heat flux (cell average)" standard_name="surface_downward_latent_heat_flux" unit="W/m2" />
<field id="qsr_io_cea" long_name="Ice-Oce downward solar heat flux (cell average)" standard_name="net_downward_shortwave_flux_at_sea_water_surface" unit="W/m2" />
<field id="qns_io_cea" long_name="Ice-Oce downward non-solar heat flux (cell average)" unit="W/m2" />
<field id="iceprod_cea" long_name="Ice production (cell average)" unit="m/s" />
<field id="iiceconc" long_name="Ice concentration" standard_name="sea_ice_area_fraction" unit="1" />
<field id="ice_pres" long_name="Ice presence" unit="" />
<field id="ist_cea" long_name="Ice surface temperature (cell average)" standard_name="surface_temperature" unit="degC" />
<field id="ist_ipa" long_name="Ice surface temperature (ice presence average)" standard_name="surface_temperature" unit="degC" />
<field id="u_imasstr" long_name="Sea-ice mass transport along i-axis" standard_name="sea_ice_x_transport" unit="kg/s" />
<field id="v_imasstr" long_name="Sea-ice mass transport along j-axis" standard_name="sea_ice_y_transport" unit="kg/s" />
<!-- LIM3 fields -->
<field id="ice_cover" long_name="Ice fraction" standard_name="sea_ice_area_fraction" unit="1" />
<field id="snowthic_cea" long_name="Snow thickness (cell average)" standard_name="surface_snow_thickness" unit="m" />
<field id="icethic_cea" long_name="Ice thickness (cell average)" standard_name="sea_ice_thickness" unit="m" />
<field id="uice_ipa" long_name="Ice velocity along i-axis at I-point (ice presence average)" standard_name="sea_ice_x_velocity" unit="m/s" />
<field id="vice_ipa" long_name="Ice velocity along j-axis at I-point (ice presence average)" standard_name="sea_ice_y_velocity" unit="m/s" />
<field id="utau_ice" long_name="Wind stress along i-axis over the ice at i-point" standard_name="surface_downward_x_stress" unit="N/m2" />
<field id="vtau_ice" long_name="Wind stress along j-axis over the ice at i-point" standard_name="surface_downward_y_stress" unit="N/m2" />
<field id="iceconc" long_name="ice concentration" standard_name="sea_ice_area_fraction" unit="%" />
<field id="isst" long_name="sea surface temperature" standard_name="sea_surface_temperature" unit="degC" />
<field id="isss" long_name="sea surface salinity" standard_name="sea_surface_salinity" unit="1e-3" />
<field id="qt_oce" long_name="total flux at ocean surface" standard_name="surface_downward_heat_flux_in_sea_water" unit="W/m2" />
<field id="qsr_oce" long_name="solar heat flux at ocean surface" standard_name="net_downward_shortwave_flux_at_sea_water_surface" unit="W/m2" />
<field id="qt_ice" long_name="total heat flux at ice surface: sum over categories" standard_name="surface_downward_heat_flux_in_air" unit="W/m2" />
<field id="qsr_ice" long_name="solar heat flux at ice surface: sum over categories" standard_name="surface_downwelling_shortwave_flux_in_air" unit="W/m2" />
<field id="qns_ice" long_name="non-solar heat flux at ice surface: sum over categories" unit="W/m2" />
<field id="qtr_ice" long_name="solar heat flux transmitted through ice: sum over categories" unit="W/m2" />
<field id="qemp_ice" long_name="Downward Heat Flux from E-P over ice" unit="W/m2" />
<field id="micesalt" long_name="Mean ice salinity" unit="1e-3" />
<field id="miceage" long_name="Mean ice age" unit="years" />
<field id="alb_ice" long_name="Mean albedo over sea ice" unit="" />
<field id="albedo" long_name="Mean albedo over sea ice and ocean" unit="" />
<field id="iceage_cat" long_name="Ice age for categories" unit="days" grid_ref="grid_T_3D_ncatice" />
<field id="iceconc_cat" long_name="Ice concentration for categories" unit="%" grid_ref="grid_T_3D_ncatice" />
<field id="icethic_cat" long_name="Ice thickness for categories" unit="m" grid_ref="grid_T_3D_ncatice" />
<field id="snowthic_cat" long_name="Snow thicknessi for categories" unit="m" grid_ref="grid_T_3D_ncatice" />
<field id="salinity_cat" long_name="Sea-Ice Bulk salinity for categories" unit="g/kg" grid_ref="grid_T_3D_ncatice" />
<field id="brinevol_cat" long_name="Brine volume for categories" unit="%" grid_ref="grid_T_3D_ncatice" />
<field id="icetemp_cat" long_name="Ice temperature for categories" unit="degC" grid_ref="grid_T_3D_ncatice" />
<field id="snwtemp_cat" long_name="Snow temperature for categories" unit="degC" grid_ref="grid_T_3D_ncatice" />
<field id="micet" long_name="Mean ice temperature" unit="degC" />
<field id="icehc" long_name="ice total heat content" unit="10^9J" />
<field id="isnowhc" long_name="snow total heat content" unit="10^9J" />
<field id="icest" long_name="ice surface temperature" unit="degC" />
<field id="ibrinv" long_name="brine volume" unit="%" />
<field id="icecolf" long_name="frazil ice collection thickness" unit="m" />
<field id="icestr" long_name="ice strength" unit="N/m" />
<field id="icevel" long_name="ice velocity" unit="m/s" />
<field id="idive" long_name="divergence" unit="1e-8s-1" />
<field id="ishear" long_name="shear" unit="1e-8s-1" />
<field id="icevolu" long_name="ice volume" unit="m" />
<field id="snowvol" long_name="snow volume" unit="m" />
<field id="tau_icebfr" long_name="ice friction on ocean bottom for landfast ice" unit="N/2" />
<field id="icetrp" long_name="ice volume transport" unit="m/day" />
<field id="snwtrp" long_name="snw volume transport" unit="m/day" />
<field id="saltrp" long_name="salt content transport" unit="1e-3*kg/m2/day" />
<field id="deitrp" long_name="advected ice enthalpy" unit="W/m2" />
<field id="destrp" long_name="advected snw enthalpy" unit="W/m2" />
<field id="sfxbri" long_name="brine salt flux" unit="1e-3*kg/m2/day" />
<field id="sfxdyn" long_name="salt flux from ridging rafting" unit="1e-3*kg/m2/day" />
<field id="sfxres" long_name="salt flux from lipupdate (resultant)" unit="1e-3*kg/m2/day" />
<field id="sfxbog" long_name="salt flux from bot growth" unit="1e-3*kg/m2/day" />
<field id="sfxbom" long_name="salt flux from bot melt" unit="1e-3*kg/m2/day" />
<field id="sfxsum" long_name="salt flux from surf melt" unit="1e-3*kg/m2/day" />
<field id="sfxlam" long_name="salt flux from lateral melt" unit="1e-3*kg/m2/day" />
<field id="sfxsni" long_name="salt flux from snow-ice formation" unit="1e-3*kg/m2/day" />
<field id="sfxopw" long_name="salt flux from open water ice formation" unit="1e-3*kg/m2/day" />
<field id="sfxsub" long_name="salt flux from sublimation" unit="1e-3*kg/m2/day" />
<field id="sfx" long_name="salt flux total" unit="1e-3*kg/m2/day" />
<field id="vfxbog" long_name="daily bottom thermo ice prod." unit="m/day" />
<field id="vfxdyn" long_name="daily dynamic ice prod." unit="m/day" />
<field id="vfxopw" long_name="daily lateral thermo ice prod." unit="m/day" />
<field id="vfxsni" long_name="daily snowice ice prod." unit="m/day" />
<field id="vfxsum" long_name="surface melt" unit="m/day" />
<field id="vfxlam" long_name="lateral melt" unit="m/day" />
<field id="vfxbom" long_name="bottom melt" unit="m/day" />
<field id="vfxres" long_name="daily resultant ice prod./melting from limupdate" unit="m/day" />
<field id="vfxice" long_name="ice melt/growth" unit="m/day" />
<field id="vfxsnw" long_name="snw melt/growth" unit="m/day" />
<field id="vfxsub" long_name="snw sublimation" unit="m/day" />
<field id="vfxsub_err" long_name="excess of snw sublimation sent to ocean" unit="m/day" />
<field id="vfxspr" long_name="snw precipitation on ice" unit="m/day" />
<field id="vfxthin" long_name="daily thermo ice prod. for thin ice(20cm) + open water" unit="m/day" />
<field id="afxtot" long_name="area tendency (total)" unit="day-1" />
<field id="afxdyn" long_name="area tendency (dynamics)" unit="day-1" />
<field id="afxthd" long_name="area tendency (thermo)" unit="day-1" />
<field id="hfxsum" long_name="heat fluxes causing surface ice melt" unit="W/m2" />
<field id="hfxbom" long_name="heat fluxes causing bottom ice melt" unit="W/m2" />
<field id="hfxbog" long_name="heat fluxes causing bottom ice growth" unit="W/m2" />
<field id="hfxdif" long_name="heat fluxes causing ice temperature change" unit="W/m2" />
<field id="hfxopw" long_name="heat fluxes causing open water ice formation" unit="W/m2" />
<field id="hfxsnw" long_name="heat fluxes causing snow melt" unit="W/m2" />
<field id="hfxerr" long_name="heat fluxes error after heat diffusion" unit="W/m2" />
<field id="hfxerr_rem" long_name="heat fluxes error after remapping" unit="W/m2" />
<field id="hfxout" long_name="total heat fluxes received by the ocean" unit="W/m2" />
<field id="hfxin" long_name="total heat fluxes at the ice/ocean surface" unit="W/m2" />
<!-- heat flux associated with mass exchange -->
<field id="hfxthd" long_name="heat fluxes from ice-ocean mass exchange during thermo" unit="W/m2" />
<field id="hfxdyn" long_name="heat fluxes from ice-ocean mass exchange during dynamic" unit="W/m2" />
<field id="hfxres" long_name="heat fluxes from ice-ocean mass exchange during resultant" unit="W/m2" />
<field id="hfxsub" long_name="heat fluxes from ice-atm. mass exchange during sublimation" unit="W/m2" />
<field id="hfxspr" long_name="heat fluxes from ice-atm. mass exchange during snow precip" unit="W/m2" />
<!-- diags -->
<field id="hfxdhc" long_name="Heat content variation in snow and ice" unit="W/m2" />
<field id="hfxtur" long_name="turbulent heat flux at the ice base" unit="W/m2" />
<!-- sbcssm variables -->
<field id="sst_m" unit="degC" />
<field id="sss_m" unit="psu" />
<field id="ssu_m" unit="m/s" />
<field id="ssv_m" unit="m/s" />
<field id="ssh_m" unit="m" />
<field id="e3t_m" unit="m" />
<field id="frq_m" unit="-" />
</field_group>
<!-- LIM3 scalar variables -->
<field_group id="SBC_scalar" grid_ref="grid_T_2D" >
<!-- available with ln_limdiaout -->
<field id="ibgfrcvoltop" long_name="global mean ice/snow forcing at interface ice/snow-atm (volume equivalent ocean volume)" unit="km3" />
<field id="ibgfrcvolbot" long_name="global mean ice/snow forcing at interface ice/snow-ocean (volume equivalent ocean volume)" unit="km3" />
<field id="ibgfrctemtop" long_name="global mean heat on top of ice/snw/ocean-atm " unit="1e20J" />
<field id="ibgfrctembot" long_name="global mean heat below ice (on top of ocean) " unit="1e20J" />
<field id="ibgfrcsal" long_name="global mean ice/snow forcing (salt equivalent ocean volume)" unit="pss*km3" />
<field id="ibgfrchfxtop" long_name="global mean heat flux on top of ice/snw/ocean-atm " unit="W/m2" />
<field id="ibgfrchfxbot" long_name="global mean heat flux below ice (on top of ocean) " unit="W/m2" />
<field id="ibgvolume" long_name="drift in ice/snow volume (equivalent ocean volume)" unit="km3" />
<field id="ibgsaltco" long_name="drift in ice salt content (equivalent ocean volume)" unit="pss*km3" />
<field id="ibgheatco" long_name="drift in ice/snow heat content" unit="1e20J" />
<field id="ibgheatfx" long_name="drift in ice/snow heat flux" unit="W/m2" />
<field id="ibgvol_tot" long_name="global mean ice volume" unit="km3" />
<field id="sbgvol_tot" long_name="global mean snow volume" unit="km3" />
<field id="ibgarea_tot" long_name="global mean ice area" unit="km2" />
<field id="ibgsalt_tot" long_name="global mean ice salt content" unit="1e-3*km3" />
<field id="ibgheat_tot" long_name="global mean ice heat content" unit="1e20J" />
<field id="sbgheat_tot" long_name="global mean snow heat content" unit="1e20J" />
</field_group>
<!--
============================================================================================================
-->
<!-- output variables for my configuration (example) -->
<field_group id="myvarICE" >
<field field_ref="icethic_cea" name="sithic" long_name="sea_ice_thickness" />
<field field_ref="icevolu" name="sivolu" />
<field field_ref="iceconc" name="siconc" />
</field_group>
</field_definition>
EXP_Apr19/field_def_nemo-opa.xml
+ 1107
- 0

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View file @ 61486f74