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Commit b0f9e28d authored by James Harle's avatar James Harle
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Adding namelist and example ncml file

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inputs/namelist.bdy 0 → 100644
View file @ b0f9e28d
!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
!! NEMO/OPA : namelist for BDY generation tool
!!
!! User inputs for generating open boundary conditions
!! employed by the BDY module in NEMO. Boundary data
!! can be set up for v3.2 NEMO and above.
!!
!! More info here.....
!!
!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
!-----------------------------------------------------------------------
! vertical coordinate
!-----------------------------------------------------------------------
ln_zco = .false. ! z-coordinate - full steps (T/F)
ln_zps = .true. ! z-coordinate - partial steps (T/F)
ln_sco = .false. ! s- or hybrid z-s-coordinate (T/F)
rn_hmin = -10 ! min depth of the ocean (>0) or
! min number of ocean level (<0)
!-----------------------------------------------------------------------
! s-coordinate or hybrid z-s-coordinate
!-----------------------------------------------------------------------
rn_sbot_min = 10. ! minimum depth of s-bottom surface (>0) (m)
rn_sbot_max = 7000. ! maximum depth of s-bottom surface
! (= ocean depth) (>0) (m)
ln_s_sigma = .false. ! hybrid s-sigma coordinates
rn_hc = 150.0 ! critical depth with s-sigma
!-----------------------------------------------------------------------
! grid information
!-----------------------------------------------------------------------
sn_src_hgr = '/Users/jdha/Data/nrct/benchmark/grid_low_res_C/mesh_hgr.nc' ! /grid/
sn_src_zgr = '/Users/jdha/Data/nrct/benchmark/grid_low_res_C/mesh_zgr.nc'
sn_dst_hgr = '/Users/jdha/Data/nrct/benchmark/grid_C/mesh_hgr_zps.nc'
sn_dst_zgr = '/Users/jdha/Data/nrct/benchmark/grid_C/mesh_zgr_zps.nc'
sn_src_msk = '/Users/jdha/Data/nrct/benchmark/grid_low_res_C/mask.nc'
sn_bathy = '/Users/jdha/Data/nrct/benchmark/grid_C/NNA_R12_bathy_meter_bench.nc'
!-----------------------------------------------------------------------
! I/O
!-----------------------------------------------------------------------
sn_src_dir = 'src_data.ncml' ! src_files/'
sn_dst_dir = '/Users/jdha/Data/scratch/'
sn_fn = 'NNA_R12' ! prefix for output files
nn_fv = -1e20 ! set fill value for output files
nn_src_time_adj = 0 ! src time adjustment
sn_dst_metainfo = 'EB bdy files produced by jdha from ORCA0083-N001 gloabl run provided by acc'
!-----------------------------------------------------------------------
! unstructured open boundaries
!-----------------------------------------------------------------------
ln_coords_file = .true. ! =T : produce bdy coordinates files
cn_coords_file = 'coordinates.bdy.nc' ! name of bdy coordinates files (if ln_coords_file=.TRUE.)
ln_mask_file = .false. ! =T : read mask from file
cn_mask_file = 'F:/NEMO_bdy_tools/scratch/testmask.nc' ! name of mask file (if ln_mask_file=.TRUE.)
ln_dyn2d = .false. ! boundary conditions for barotropic fields
ln_dyn3d = .false. ! boundary conditions for baroclinic velocities
ln_tra = .true. ! boundary conditions for T and S
ln_ice = .false. ! ice boundary condition
nn_rimwidth = 9 ! width of the relaxation zone
!-----------------------------------------------------------------------
! unstructured open boundaries tidal parameters
!-----------------------------------------------------------------------
ln_tide = .false. ! =T : produce bdy tidal conditions
clname(1) = 'M2' ! constituent name
clname(2) = 'S2'
clname(3) = 'K2'
ln_trans = .true.
!-----------------------------------------------------------------------
! Time information
!-----------------------------------------------------------------------
nn_year_000 = 1979 ! year start
nn_year_end = 1979 ! year end
nn_month_000 = 11 ! month start (default = 1 is years>1)
nn_month_end = 11 ! month end (default = 12 is years>1)
sn_dst_calendar = 'gregorian' ! output calendar format
nn_base_year = 1960 ! base year for time counter
sn_tide_grid = 'F:/NEMO_bdy_tools/bdy_matlab/bdy_matlab/tmd/DATA/grid_tpxo7.2.nc'
sn_tide_h = 'F:/NEMO_bdy_tools/bdy_matlab/bdy_matlab/tmd/DATA/h_tpxo7.2.nc'
sn_tide_u = 'F:/NEMO_bdy_tools/bdy_matlab/bdy_matlab/tmd/DATA/u_tpxo7.2.nc'
!-----------------------------------------------------------------------
! Additional parameters
!-----------------------------------------------------------------------
nn_wei = 1 ! smoothing filter weights
rn_r0 = 0.041666666 ! decorrelation distance use in gauss
! smoothing onto dst points. Need to
! make this a funct. of dlon
sn_history = 'EB bdy files produced by jofa from ORCA0083-N001 for testing'
! history for netcdf file
ln_nemo3p4 = .true. ! else presume v3.2 or v3.3
nn_alpha = 0 ! Euler rotation angle
nn_beta = 0 ! Euler rotation angle
nn_gamma = 0 ! Euler rotation angle
rn_mask_max_depth = 100.0 ! Maximum depth to be ignored for the mask
rn_mask_shelfbreak_dist = 20000.0 ! Distance from the shelf break
inputs/src_data.ncml 0 → 100644
View file @ b0f9e28d
<?xml version="1.0" encoding="UTF-8"?>
<netcdf title="aggregation example" xmlns="http://www.unidata.ucar.edu/namespaces/netcdf/ncml-2.2">
<aggregation type="union" >
<netcdf xmlns="http://www.unidata.ucar.edu/namespaces/netcdf/ncml-2.2">
<aggregation type="joinExisting" dimName="time_counter" >
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791101d05V.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791106d05V.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791111d05V.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791116d05V.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791121d05V.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791126d05V.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791201d05V.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791206d05V.nc" />
</aggregation>
</netcdf>
<netcdf xmlns="http://www.unidata.ucar.edu/namespaces/netcdf/ncml-2.2">
<aggregation type="joinExisting" dimName="time_counter" >
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791101d05U.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791106d05U.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791111d05U.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791116d05U.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791121d05U.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791126d05U.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791201d05U.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791206d05U.nc" />
</aggregation>
</netcdf>
<netcdf xmlns="http://www.unidata.ucar.edu/namespaces/netcdf/ncml-2.2">
<aggregation type="joinExisting" dimName="time_counter" >
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791101d05T.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791106d05T.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791111d05T.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791116d05T.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791121d05T.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791126d05T.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791201d05T.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791206d05T.nc" />
</aggregation>
</netcdf>
<netcdf xmlns="http://www.unidata.ucar.edu/namespaces/netcdf/ncml-2.2">
<aggregation type="joinExisting" dimName="time_counter" >
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791101d05I.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791106d05I.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791111d05I.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791116d05I.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791121d05I.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791126d05I.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791201d05I.nc" />
<netcdf location="/Users/jdha/Data/nrct/benchmark/data/ORCA025-N206_19791206d05I.nc" />
</aggregation>
</netcdf>
</aggregation>
</netcdf>
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